Jatropha Genome Database

JcCB0083591.10 (JcS_111708.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0083591
Scaffold:
JcS_111708 JcCB0083591(-) =JcCA0275141(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9GWE8_POPTR 269 86.2 90.3 (tr|B9GWE8) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_817339 PE=4 SV=1
Arabidopsis_pep AT1G63160.1 258 85.4 87.5 | Symbols: | replication factor C 40 kDa, putative | chr1:23422068-23423771 REVERSE
soybean_pep Glyma05g03440.1 265 86.8 89.6  
Medicago_pep IMGA|Medtr3g100750.1 48.9 22.7 51.3 AAA ATPase, central region chr03_pseudomolecule_IMGAG_V3 24245152-24251862 F EGN_Mt090430 20090702
grape_pep GSVIVT01019825001 268 87.5 90.3  
castor_bean_cds 30190.m011152 549 90.8 90.8 replication factor C / DNA polymerase III gamma-tau subunit, putative
castor_bean_pep 30190.m011152 267 86.2 91.0 replication factor C / DNA polymerase III gamma-tau subunit, putative
JAT_13201ests gi|268518111|gb|FM888385.1|FM888385 109 100.0 100.0 FM888385 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001790, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0083591.10 length: 160 aa.
IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006260 DNA replication    
superfamily SSF48019 DNA 1.1e-26 63-156
IPR013748 Replication factor C
Molecular Function GO:0003689 DNA clamp loader activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005663 DNA replication factor C complex    
Biological Process GO:0006260 DNA replication    
HMMPfam PF08542 Rep_fac_C 4.1e-27 62-150
no_ID  
Gene3D G3DSA:1.10.8.60 no description 3.7e-13 7-63
Gene3D G3DSA:1.20.272.10 no description 2.3e-27 64-157
Seg seg seg NA 141-152