| JcS_102307 | JcCB0416211(-) =JcCB0267531(-) =JcCB0779721(-) =JcCB0082871(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9RAI4_RICCO | 314 | 56.1 | 63.8 | (tr|B9RAI4) WD-repeat protein, putative OS=Ricinus communis GN=RCOM_1506640 PE=4 SV=1 |
| Arabidopsis_pep | AT3G49180.1 | 92.8 | 27.7 | 40.4 | | Symbols: RID3 | RID3 (ROOT INITIATION DEFECTIVE 3); nucleotide binding | chr3:18229810-18231874 FORWARD |
| soybean_pep | Glyma05g03160.1 | 192 | 41.6 | 51.8 | |
| Medicago_pep | IMGA|Medtr8g109510.1 | 188 | 38.4 | 51.4 | transducin family protein chr08_pseudomolecule_IMGAG_V3 24576369-24571666 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01008513001 | 168 | 48.1 | 57.4 | |
| castor_bean_cds | 30147.m014530 | 500 | 84.7 | 84.7 | WD-repeat protein, putative |
| castor_bean_pep | 30147.m014530 | 314 | 56.1 | 63.8 | WD-repeat protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCB0082871.10 | length: 301 aa. | |||
| IPR001680 | WD40 repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMSmart | SM00320 | no description | 2e-05 | 29-68 82-119 122-160 173-210 |
| IPR011046 | WD40 repeat-like-containing domain | |||
| superfamily | SSF50978 | WD40 | 1.9e-34 | 2-257 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | |||
| Gene3D | G3DSA:2.130.10.10 | no description | 1.9e-33 | 9-220 |
| IPR017986 | WD40-repeat-containing domain | |||
| ProfileScan | PS50294 | WD_REPEATS_REGION | 17.271 | 1-219 |
| IPR019775 | WD40 repeat, conserved site | |||
| PatternScan | PS00678 | WD_REPEATS_1 | NA | 197-211 |
| IPR019781 | WD40 repeat, subgroup | |||
| HMMPfam | PF00400 | WD40 | 5.6e-07 | 31-68 88-119 134-158 176-210 |
| IPR019782 | WD40 repeat 2 | |||
| ProfileScan | PS50082 | WD_REPEATS_2 | 11.210 | 36-69 180-210 |
| IPR020472 | G-protein beta WD-40 repeat, region | |||
| FPrintScan | PR00320 | GPROTEINBRPT | 1.1e-06 | 55-69 106-120 197-211 |
| no_ID | ||||
| HMMPanther | PTHR18763 | WD-REPEAT | 2.9e-29 | 7-213 |
| Seg | seg | seg | NA | 49-62 78-111 |