Jatropha Genome Database

JcCB0082241.10 (JcS_100114.90)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0082241
Scaffold:
JcS_100114 JcCA0107311(-) =JcCB0186601(+) =JcCB0249501(+) =JcCA0075421(+) =JcCB0173091(-) =JcCA0254771(-) =JcCB0082241(-) =JcCB0704851(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl Q84TL5_ARATH 357 86.4 91.5 (tr|Q84TL5) At1g75760 OS=Arabidopsis thaliana GN=At1g75760 PE=2 SV=1
Arabidopsis_pep AT1G75760.1 357 86.4 91.5 | Symbols: | ER lumen protein retaining receptor family protein | chr1:28446940-28448421 REVERSE
soybean_pep Glyma04g02650.1 359 87.9 90.5  
Medicago_pep IMGA|Medtr3g156420.1 354 86.4 89.4 ER lumen protein retaining receptor; Orn/DAP/Arg decarboxylase 2 chr03_pseudomolecule_IMGAG_V3 41010513-41005039 E EGN_Mt090430 20090702
grape_pep GSVIVT01009903001 356 84.9 91.0  
castor_bean_cds 30170.m014183 482 89.5 89.5 ER lumen protein retaining receptor, putative
castor_bean_pep 29711.m000331 347 83.9 89.9 ER lumen protein retaining receptor, putative
JAT_13201ests gi|268524561|gb|FM895241.1|FM895241 113 82.9 82.9 FM895241 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002033, mRNA sequence
KJC_r1 KJC_c04343 434 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0082241.10 length: 240 aa.
IPR000133 ER lumen protein retaining receptor
method AccNumber shortName E-value location
Biological Process GO:0006621 protein retention in ER lumen    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0046923 ER retention sequence binding    
FPrintScan PR00660 ERLUMENR 2.1e-12 43-63
134-154
156-170
170-188
HMMPanther PTHR10585 ER 6.8e-156 42-236
HMMPfam PF00810 ER_lumen_recept 6.4e-41 42-183
no_ID  
HMMPanther PTHR10585:SF4 ER 6.8e-156 42-236
Seg seg seg NA 72-83