Jatropha Genome Database

JcCB0078661.20 (JcS_100108.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0078661
Scaffold:
JcS_100108 JcCD0183258(+) =JcCB0453831(-) =JcCB0080951(+) =JcCB0078661(-) =JcCB0336251(-) =JcCA0307531(+) =JcCB0569231(-) =JcPR11GWW51(-) =JcCB0824821(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RH90_RICCO 108 42.5 50.5 (tr|B9RH90) Late embryogenesis abundant protein, putative OS=Ricinus communis GN=RCOM_1448770 PE=3 SV=1
Arabidopsis_pep AT2G21490.1 63.9 69.8 83.7 | Symbols: LEA | LEA (DEHYDRIN LEA) | chr2:9206209-9207040 REVERSE
soybean_pep Glyma12g36430.1 62.8 56.6 75.5  
Medicago_pep IMGA|Medtr3g162790.1 64.7 80.0 97.1 Dehydrin chr03_pseudomolecule_IMGAG_V3 42591227-42592123 F EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds 30131.m007082 77.8 84.1 84.1 Late embryogenesis abundant protein, putative
castor_bean_pep 30131.m007082 108 42.5 50.5 Late embryogenesis abundant protein, putative
JAT_13201ests gi|268525903|gb|FM891159.1|FM891159 615 99.7 99.7 FM891159 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb1_001149, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0078661.20 length: 175 aa.
IPR000167 Dehydrin
method AccNumber shortName E-value location
Biological Process GO:0006950 response to stress    
Biological Process GO:0009415 response to water    
HMMPfam PF00257 Dehydrin 2.2e-30 14-173
PatternScan PS00315 DEHYDRIN_1 NA 101-117
PatternScan PS00823 DEHYDRIN_2 NA 162-169
no_ID  
Seg seg seg NA 85-110
111-131