Jatropha Genome Database

JcCB0077031.10 (JcS_111508.10)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0077031
Scaffold:
JcS_111508 JcCB0077031(+) =JcCB0057531(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q9ZRJ0_TOBAC 393 59.9 71.1 (tr|Q9ZRJ0) Retrotransposon Tto1 DNA OS=Nicotiana tabacum PE=4 SV=1
Arabidopsis_pep AT4G23160.1 145 39.5 60.0 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD
soybean_pep Glyma11g04990.1 196 35.5 52.7  
Medicago_pep IMGA|CU179634_24.1 155 43.2 59.0 Polynucleotidyl transferase, Ribonuclease H fold CU179634.6 87152-89450 H EGN_Mt090430 20090702
grape_pep GSVIVT01010555001 65.9 46.4 62.3  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests gi|268518791|gb|FM889034.1|FM889034 545 92.0 92.0 FM889034 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002587, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0077031.10 length: 1092 aa.
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
method AccNumber shortName E-value location
HMMPfam PF07727 RVT_2 8.5e-62 797-948
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 1e-102 623-947
Seg seg seg NA 701-715
801-814
1019-1038
1042-1048