| JcS_105572 | JcCB0079621(+) =JcCB0075281(+) =JcCB0585631(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9SW84_RICCO | 1118 | 86.4 | 88.2 | (tr|B9SW84) Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_0075460 PE=3 SV=1 |
| Arabidopsis_pep | AT1G20920.1 | 957 | 77.3 | 82.7 | | Symbols: | DEAD box RNA helicase, putative | chr1:7285342-7288842 FORWARD |
| soybean_pep | Glyma01g43960.2 | 994 | 78.8 | 84.5 | |
| Medicago_pep | IMGA|Medtr2g007080.1 | 1021 | 78.4 | 83.8 | Helicase, C-terminal; ; chr02_pseudomolecule_IMGAG_V3 957151-962448 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01028137001 | 355 | 50.0 | 65.2 | |
| castor_bean_cds | 27758.m000324 | 2179 | 89.3 | 89.3 | dead box ATP-dependent RNA helicase, putative |
| castor_bean_pep | 27758.m000324 | 1118 | 86.4 | 88.2 | dead box ATP-dependent RNA helicase, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | KJC_c05766 | 2074 | 99.4 | 99.4 |
| JcCB0075281.20 | length: 635 aa. | |||
| IPR000629 | RNA helicase, ATP-dependent, DEAD-box, conserved site | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| Molecular Function | GO:0008026 | ATP-dependent helicase activity | ||
| PatternScan | PS00039 | DEAD_ATP_HELICASE | NA | 150-158 |
| IPR001650 | DNA/RNA helicase, C-terminal | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0004386 | helicase activity | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| HMMPfam | PF00271 | Helicase_C | 3.9e-24 | 262-337 |
| HMMSmart | SM00490 | no description | 8.8e-28 | 256-337 |
| ProfileScan | PS51194 | HELICASE_CTER | 23.097 | 215-376 |
| IPR011545 | DNA/RNA helicase, DEAD/DEAH box type, N-terminal | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| Molecular Function | GO:0008026 | ATP-dependent helicase activity | ||
| HMMPfam | PF00270 | DEAD | 2.4e-49 | 20-191 |
| IPR014001 | DEAD-like helicase, N-terminal | |||
| HMMSmart | SM00487 | no description | 8.1e-63 | 14-219 |
| IPR014014 | RNA helicase, DEAD-box type, Q motif | |||
| ProfileScan | PS51195 | Q_MOTIF | 6.955 | 1-23 |
| IPR014021 | Helicase, superfamily 1/2, ATP-binding domain | |||
| ProfileScan | PS51192 | HELICASE_ATP_BIND_1 | 32.502 | 26-204 |
| no_ID | ||||
| Gene3D | G3DSA:3.40.50.300 | no description | 1.4e-45 | 4-214 213-377 |
| HMMPanther | PTHR10967 | DEAD | 1.2e-286 | 4-453 |
| HMMPanther | PTHR10967:SF45 | DEAD | 1.2e-286 | 4-453 |
| Seg | seg | seg | NA | 223-241 424-435 460-485 |
| superfamily | SSF52540 | P-loop | 5.2e-43 | 3-357 212-376 |