Jatropha Genome Database

JcCB0069321.10 (JcS_100698.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0069321
Scaffold:
JcS_100698 JcCB0751241(+) =JcPR03DJDRC(-) =JcCB0058331(-) =JcCB0069321(-) =JcCA0285281(+) =JcCB0550571(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9HTK5_POPTR 842 83.6 89.0 (tr|B9HTK5) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1092152 PE=4 SV=1
Arabidopsis_pep AT3G55400.1 790 79.8 87.8 | Symbols: OVA1 | OVA1 (OVULE ABORTION 1); ATP binding / aminoacyl-tRNA ligase/ methionine-tRNA ligase/ nucleotide binding | chr3:20535809-20538999 REVERSE
soybean_pep Glyma10g43550.1 797 79.4 86.3  
Medicago_pep IMGA|Medtr1g023340.1 578 68.7 77.2 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; ; chr01_pseudomolecule_IMGAG_V3 5142088-5136592 E EGN_Mt090430 20090702
grape_pep GSVIVT01016575001 828 83.1 90.8  
castor_bean_cds 29585.m000579 1110 90.8 90.8 methionine-tRNA synthetase, putative
castor_bean_pep 29585.m000579 613 85.7 90.0 methionine-tRNA synthetase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c05222 946 98.9 98.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0069321.10 length: 494 aa.
IPR002304 Methionyl-tRNA synthetase, class Ia
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004825 methionine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006412 translation    
Biological Process GO:0006431 methionyl-tRNA aminoacylation    
HMMTigr TIGR00398 metG: 2.7e-163 51-494
IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006412 translation    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
superfamily SSF47323 Anticodon-binding 1.7e-17 398-484
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
Gene3D G3DSA:3.40.50.620 no description 5.8e-106 47-401
IPR014758 Methionyl-tRNA synthetase, class Ia, N-terminal
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004825 methionine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006412 translation    
Biological Process GO:0006431 methionyl-tRNA aminoacylation    
FPrintScan PR01041 TRNASYNTHMET 2.2e-35 53-66
85-99
133-144
269-280
305-320
397-408
IPR015413 Aminoacyl-tRNA synthetase, class I (M)
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006412 translation    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPfam PF09334 tRNA-synt_1g 2.7e-74 183-410
no_ID  
Gene3D G3DSA:1.10.730.10 no description 1.4e-12 402-482
HMMPanther PTHR11946 ISOLEUCYL, 5.5e-130 55-483
HMMPanther PTHR11946:SF1 METHIONYL-TRNA 5.5e-130 55-483
Seg seg seg NA 103-111
superfamily SSF52374 Nucleotidylyl 4.1e-105 47-401