Jatropha Genome Database

JcCB0068881.10 (JcS_100035.70)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0068881
Scaffold:
JcS_100035 JcCB0193021(+) =JcCB0110131(-) =JcCB0588851(-) =JcCB0097241(-) =JcCA0262331(-) =JcCB0027041(-) =JcCB0068881(-) =JcCB0110871(-) =JcCB0907471(+) =JcCA0165421(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RYW0_RICCO 900 84.9 90.7 (tr|B9RYW0) Ubiquitin carboxyl-terminal hydrolase OS=Ricinus communis GN=RCOM_1314030 PE=3 SV=1
Arabidopsis_pep AT4G10570.1 665 64.7 78.6 | Symbols: UBP9 | UBP9 (UBIQUITIN-SPECIFIC PROTEASE 9); cysteine-type endopeptidase/ ubiquitin thiolesterase | chr4:6523657-6528058 REVERSE
soybean_pep Glyma20g36020.1 705 69.7 80.1  
Medicago_pep IMGA|Medtr7g105660.1 501 48.9 67.9 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; Ubiquitin carboxyl-terminal hydrolase, N-terminal region 2 chr07_pseudomolecule_IMGAG_V3 24271300-24260562 E EGN_Mt090430 20090702
grape_pep GSVIVT01019677001 753 72.2 83.3  
castor_bean_cds 30068.m002596 1122 84.1 84.1 Ubiquitin carboxyl-terminal hydrolase, putative
castor_bean_pep 30068.m002596 900 84.9 90.7 Ubiquitin carboxyl-terminal hydrolase, putative
JAT_13201ests gi|268517484|gb|FM889195.1|FM889195 892 99.1 99.1 FM889195 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002787, mRNA sequence
KJC_r1 KJC_c09698 1620 99.6 99.6  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0068881.10 length: 522 aa.
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
method AccNumber shortName E-value location
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF00443 UCH 2.9e-51 5-501
ProfileScan PS50235 UCH_2_3 24.270 1-505
IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
PatternScan PS00973 UCH_2_2 NA 446-463
no_ID  
HMMPanther PTHR10420 UBIQUITIN 1.8e-122 5-451
HMMPanther PTHR10420:SF72 UBIQUITIN 1.8e-122 5-451
superfamily SSF54001 Cysteine 9.7e-62 3-505