Jatropha Genome Database

JcCB0065971.10 (JcS_202306.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0065971
Scaffold:
JcS_202306 JcCB0065971(+) =JcCA0273941(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q9AR76_9ROSI 257 87.0 91.8 (tr|Q9AR76) Superoxide dismutase [Cu-Zn] OS=Populus tremula x Populus tremuloides GN=hipI-SOD1 PE=2 SV=1
Arabidopsis_pep AT5G18100.1 215 73.1 85.5 | Symbols: CSD3 | CSD3 (copper/zinc superoxide dismutase 3); superoxide dismutase | chr5:5987221-5988706 FORWARD
soybean_pep Glyma16g27020.2 245 80.8 90.4  
Medicago_pep IMGA|Medtr6g031060.1 244 84.4 91.2 Superoxide dismutase, copper/zinc binding chr06_pseudomolecule_IMGAG_V3 7035859-7031913 E EGN_Mt090430 20090702
grape_pep GSVIVT01033413001 249 85.5 89.7  
castor_bean_cds 29950.m001121 250 83.2 83.2 superoxide dismutase [cu-zn], putative
castor_bean_pep 30128.m008673 204 71.2 82.7 cu/zn superoxide dismutase, putative
JAT_13201ests gi|237681036|gb|GO247672.1|GO247672 71.9 100.0 100.0 JcrME_RL1216 Expressed sequence tags from Jatropha curcas root cDNA library Jatropha curcas cDNA, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0065971.10 length: 162 aa.
IPR001424 Superoxide dismutase, copper/zinc binding
method AccNumber shortName E-value location
Biological Process GO:0006801 superoxide metabolic process    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation reduction    
FPrintScan PR00068 CUZNDISMTASE 4.5e-43 50-72
86-95
105-127
131-157
Gene3D G3DSA:2.60.40.200 no description 3e-53 6-161
HMMPanther PTHR10003 CU/ZN 4.7e-70 38-158
HMMPfam PF00080 Sod_Cu 5.5e-50 12-156
superfamily SSF49329 Cu,Zn 7.6e-57 7-156
IPR018152 Superoxide dismutase, copper/zinc, binding site
PatternScan PS00087 SOD_CU_ZN_1 NA 50-60
PatternScan PS00332 SOD_CU_ZN_2 NA 145-156
no_ID  
HMMPanther PTHR10003:SF12 SUPEROXIDE 4.7e-70 38-158
Seg seg seg NA 2-16