Jatropha Genome Database

JcCB0065691.10 (JcS_105343.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0065691
Scaffold:
JcS_105343 JcCB0065691(+) =JcCA0308681(+) =JcCB0425751(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9H6Y2_POPTR 218 86.3 94.0 (tr|B9H6Y2) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_716437 PE=4 SV=1
Arabidopsis_pep AT4G14600.1 213 72.8 88.2 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil region (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29060.1); Has 95 Blast hits to 95 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 19; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | chr4:8376562-8378078 FORWARD
soybean_pep Glyma06g10370.2 203 71.0 87.8  
Medicago_pep IMGA|Medtr5g074660.1 206 71.8 87.8 Target SNARE coiled-coil region chr05_pseudomolecule_IMGAG_V3 26996178-26993779 F EGN_Mt090430 20090702
grape_pep GSVIVT01009122001 198 66.4 87.8  
castor_bean_cds 29908.m006115 212 86.0 86.0 conserved hypothetical protein
castor_bean_pep 29908.m006115 150 79.8 86.5 conserved hypothetical protein
JAT_13201ests gi|268522908|gb|FM896351.1|FM896351 731 98.5 98.5 FM896351 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003555, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0065691.10 length: 133 aa.
IPR000727 Target SNARE coiled-coil domain
method AccNumber shortName E-value location
ProfileScan PS50192 T_SNARE 11.268 40-102