Jatropha Genome Database

JcCB0064191.10 (JcS_100433.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0064191
Scaffold:
JcS_100433 JcCA0267531(-) =JcCB0429441(+) =JcCD0128967(-) =JcCB0064191(+) =JcCB0517161(+) =JcCB0284631(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S2W1_RICCO 275 85.3 94.9 (tr|B9S2W1) Replication factor C / DNA polymerase III gamma-tau subunit, putative OS=Ricinus communis GN=RCOM_0562940 PE=4 SV=1
Arabidopsis_pep AT1G21690.1 238 73.2 86.6 | Symbols: emb1968 | emb1968 (embryo defective 1968); ATP binding / ATPase/ DNA binding / DNA clamp loader/ nucleoside-triphosphatase/ nucleotide binding | chr1:7615675-7618362 FORWARD
soybean_pep Glyma04g42550.1 238 74.7 84.8  
Medicago_pep IMGA|Medtr3g100710.1 247 76.9 87.2 AAA ATPase, central region chr03_pseudomolecule_IMGAG_V3 24169522-24164910 E EGN_Mt090430 20090702
grape_pep GSVIVT01008825001 260 84.0 91.0  
castor_bean_cds 29648.m002000 478 85.5 85.5 replication factor C / DNA polymerase III gamma-tau subunit, putative
castor_bean_pep 29648.m002000 275 85.3 94.9 replication factor C / DNA polymerase III gamma-tau subunit, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c02320 484 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0064191.10 length: 205 aa.
IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006260 DNA replication    
superfamily SSF48019 DNA 2.1e-12 99-167
IPR013748 Replication factor C
Molecular Function GO:0003689 DNA clamp loader activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005663 DNA replication factor C complex    
Biological Process GO:0006260 DNA replication    
HMMPfam PF08542 Rep_fac_C 2.7e-11 106-167
no_ID  
Gene3D G3DSA:1.10.8.60 no description 1.1e-13 15-98
Gene3D G3DSA:1.20.272.10 no description 3.6e-12 99-167
HMMPanther PTHR11669 REPLICATION 1.2e-21 16-168
superfamily SSF52540 P-loop 2.1e-13 13-97