Jatropha Genome Database

JcCB0061321.10 (JcS_102744.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0061321
Scaffold:
JcS_102744 JcSR144095f(+) =JcCA0080871(+) =JcCB0061321(-) =JcCB0889381(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q39408_BRACM 62.0 60.7 70.5 (tr|Q39408) Putative ubiquitin extension protein (Fragment) OS=Brassica campestris PE=2 SV=1
Arabidopsis_pep AT3G52590.1 62.4 54.1 65.6 | Symbols: UBQ1, EMB2167, ERD16, HAP4 | UBQ1 (UBIQUITIN EXTENSION PROTEIN 1); protein binding / structural constituent of ribosome | chr3:19505668-19506681 FORWARD
soybean_pep Glyma19g38170.1 61.2 58.1 69.4  
Medicago_pep IMGA|Medtr3g123290.1 58.9 56.5 67.7 Ubiquitin; Ribosomal protein L40e chr03_pseudomolecule_IMGAG_V3 30889444-30886075 E EGN_Mt090430 20090702
grape_pep GSVIVT01038617001 61.6 58.1 69.4  
castor_bean_cds 30000.m000379 63.9 83.6 83.6 ubiquitin, putative
castor_bean_pep 28629.m000567 61.2 58.1 69.4 ubiquitin, putative
JAT_13201ests gi|237680047|gb|GO247352.1|GO247352 176 85.7 85.7 JcrME_RL0896 Expressed sequence tags from Jatropha curcas root cDNA library Jatropha curcas cDNA, mRNA sequence
KJC_r1 KJC_c01919 176 85.7 85.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0061321.10 length: 97 aa.
IPR001975 Ribosomal protein L40e
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPfam PF01020 Ribosomal_L40e 3.3e-10 63-95