Jatropha Genome Database

JcCB0060211.10 (JcS_100179.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0060211
Scaffold:
JcS_100179 JcCB0060211(+) =JcCB0171551(+) =JcCD0159961(+) =JcCA0298381(+) =JcPR02JKLVA(-) =JcCB0273241(+) =JcPR04GRZMU(+) =JcCB0057251(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RS46_RICCO 563 82.4 90.7 (tr|B9RS46) Aspartate aminotransferase, putative OS=Ricinus communis GN=RCOM_0802960 PE=4 SV=1
Arabidopsis_pep AT5G11520.1 491 67.9 84.1 | Symbols: ASP3, YLS4 | ASP3 (ASPARTATE AMINOTRANSFERASE 3); L-aspartate:2-oxoglutarate aminotransferase | chr5:3685257-3687721 REVERSE
soybean_pep Glyma06g08670.1 501 71.1 85.7  
Medicago_pep IMGA|Medtr4g110030.1 313 46.8 66.2 Aspartate/other aminotransferase; ; chr04_pseudomolecule_IMGAG_V3 24784975-24779539 E EGN_Mt090430 20090702
grape_pep GSVIVT01035662001 504 71.7 86.7  
castor_bean_cds 29794.m003445 841 86.8 86.8 aspartate aminotransferase, putative
castor_bean_pep 29794.m003445 563 82.4 90.7 aspartate aminotransferase, putative
JAT_13201ests gi|268524941|gb|FM895639.1|FM895639 113 78.8 78.8 FM895639 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002593, mRNA sequence
KJC_r1 KJC_c01596 157 79.1 79.1  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0060211.10 length: 329 aa.
IPR000796 Aspartate/other aminotransferase
method AccNumber shortName E-value location
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0008483 transaminase activity    
FPrintScan PR00799 TRANSAMINASE 9.9e-61 103-122
134-148
170-190
202-227
270-288
296-314
HMMPanther PTHR11879 ASPARTATE 4.9e-178 14-329
IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
PatternScan PS00105 AA_TRANSFER_CLASS_1 NA 172-185
IPR004839 Aminotransferase, class I/II
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016769 transferase activity, transferring nitrogenous groups    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00155 Aminotran_1_2 1.6e-72 3-321
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 2.6e-86 14-243
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 1.7e-89 15-327
no_ID  
Coil coil coiled-coil NA 233-254