| JcS_101369 | JcCB0756221(-) =JcCB0059061(-) =JcCB0453321(+) =JcCB0450851(-) =JcCB0005461(+) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9HSU9_POPTR | 363 | 69.9 | 83.3 | (tr|B9HSU9) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_885217 PE=4 SV=1 |
| Arabidopsis_pep | AT3G24320.1 | 259 | 52.7 | 69.4 | | Symbols: MSH1, CHM1, ATMSH1, CHM | MSH1 (MUTL PROTEIN HOMOLOG 1); ATP binding / catalytic/ damaged DNA binding / mismatched DNA binding / nuclease | chr3:8823229-8829571 REVERSE |
| soybean_pep | Glyma10g26450.1 | 238 | 57.0 | 70.9 | |
| Medicago_pep | IMGA|Medtr1g065690.1 | 285 | 59.7 | 73.1 | Excinuclease ABC, C subunit, N-terminal; MutS 1 protein chr01_pseudomolecule_IMGAG_V3 13157439-13142729 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01027931001 | 297 | 61.8 | 72.4 | |
| castor_bean_cds | 30008.m000792 | 167 | 90.9 | 90.9 | hypothetical protein |
| castor_bean_pep | 30008.m000792 | 108 | 89.3 | 96.4 | hypothetical protein |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | KJC_c10568 | 527 | 100.0 | 100.0 |
| JcCB0059061.10 | length: 246 aa. | |||
| IPR000305 | Excinuclease ABC, C subunit, N-terminal | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0004518 | nuclease activity | ||
| Cellular Component | GO:0005622 | intracellular | ||
| Biological Process | GO:0006281 | DNA repair | ||
| HMMPfam | PF01541 | GIY-YIG | 4.9e-07 | 155-215 |
| superfamily | SSF82771 | GIY-YIG | 6.4e-09 | 153-231 |
| IPR000432 | DNA mismatch repair protein MutS, C-terminal | |||
| Molecular Function | GO:0005524 | ATP binding | ||
| Biological Process | GO:0006298 | mismatch repair | ||
| Molecular Function | GO:0030983 | mismatched DNA binding | ||
| HMMPanther | PTHR11361 | DNA | 1.1e-26 | 1-51 |
| no_ID | ||||
| HMMPanther | PTHR11361:SF16 | MUTS | 1.1e-26 | 1-51 |