| JcS_109966 | JcCB0398491(+) =JcCB0055861(+) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | A5BK39_VITVI | 90.1 | 61.3 | 83.9 | (tr|A5BK39) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040997 PE=3 SV=1 |
| Arabidopsis_pep | AT1G22130.1 | 88.6 | 62.9 | 83.9 | | Symbols: AGL104 | AGL104 (AGAMOUS-LIKE 104); DNA binding / transcription factor | chr1:7812387-7814259 REVERSE |
| soybean_pep | Glyma14g34160.1 | 90.9 | 61.3 | 87.1 | |
| Medicago_pep | IMGA|AC235748_9.1 | 84.0 | 57.4 | 82.0 | Transcription factor, MADS-box AC235748.1 27637-29898 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01009393001 | 88.2 | 60.7 | 85.2 | |
| castor_bean_cds | 29838.m001690 | 50.1 | 83.6 | 83.6 | mads box protein, putative |
| castor_bean_pep | 29908.m005982 | 89.7 | 62.9 | 85.5 | mads box protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCB0055861.10 | length: 62 aa. | |||
| IPR002100 | Transcription factor, MADS-box | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003700 | transcription factor activity | ||
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Molecular Function | GO:0043565 | sequence-specific DNA binding | ||
| FPrintScan | PR00404 | MADSDOMAIN | 1.6e-23 | 3-23 23-38 38-59 |
| HMMPfam | PF00319 | SRF-TF | 4.4e-23 | 9-57 |
| HMMSmart | SM00432 | no description | 2.3e-30 | 1-60 |
| PatternScan | PS00350 | MADS_BOX_1 | NA | 3-57 |
| ProfileScan | PS50066 | MADS_BOX_2 | 26.534 | 1-61 |
| superfamily | SSF55455 | SRF-like | 3.3e-22 | 1-57 |
| no_ID | ||||
| HMMPanther | PTHR11945 | MADS | 4.1e-31 | 10-57 |
| HMMPanther | PTHR11945:SF19 | MADS | 4.1e-31 | 10-57 |