Jatropha Genome Database

JcCB0052451.10 (JcS_100267.30)   /short
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0052451
Scaffold:
JcS_100267 JcCB0113691(+) =JcCB0052451(+) =JcCB0187481(+) =JcCB0828941(+) =JcCB0019891(-) =JcCA0142841(-) =JcCB0614461(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9T1R2_RICCO 98.6 97.8 100.0 (tr|B9T1R2) Iron-sulfur assembly protein IscA, chloroplast, putative OS=Ricinus communis GN=RCOM_0462630 PE=4 SV=1
Arabidopsis_pep AT1G10500.1 96.7 95.7 97.8 | Symbols: ATCPISCA | ATCPISCA (chloroplast-localized IscA-like protein); structural molecule | chr1:3460160-3461340 REVERSE
soybean_pep Glyma08g15090.1 98.2 97.8 100.0  
Medicago_pep IMGA|Medtr4g141040.1 94.7 93.5 97.8 HesB/YadR/YfhF chr04_pseudomolecule_IMGAG_V3 34725581-34723350 E EGN_Mt090430 20090702
grape_pep GSVIVT01022247001 95.5 95.7 100.0  
castor_bean_cds 29583.m000188 186 92.0 92.0 Iron-sulfur assembly protein IscA, chloroplast precursor, putative
castor_bean_pep 29583.m000188 98.6 97.8 100.0 Iron-sulfur assembly protein IscA, chloroplast precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0052451.10 length: 46 aa.
IPR000361 FeS cluster biogenesis
method AccNumber shortName E-value location
Gene3D G3DSA:2.60.300.12 no description 0.00073 1-30
HMMPanther PTHR10072 HES-B 1.2e-16 2-42
HMMPfam PF01521 Fe-S_biosyn 3.5e-05 1-30
superfamily SSF89360 HesB-like 4.4e-08 1-34
IPR017870 FeS cluster insertion, C-terminal, conserved site
PatternScan PS01152 HESB NA 25-42
no_ID  
HMMPanther PTHR10072:SF26 HES-B 1.2e-16 2-42