| JcS_202136 | JcCB0050421(-) =JcCB1005791(+) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | A5BJD2_VITVI | 1629 | 46.7 | 63.1 | (tr|A5BJD2) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020846 PE=4 SV=1 |
| Arabidopsis_pep | ATMG00860.1 | 89.7 | 35.6 | 55.3 | | Symbols: ORF158 | hypothetical protein | chrM:235916-236392 FORWARD |
| soybean_pep | Glyma06g40570.1 | 1187 | 59.1 | 74.2 | |
| Medicago_pep | IMGA|Medtr4g041210.1 | 379 | 30.6 | 48.8 | RNA-directed DNA polymerase (Reverse transcriptase); Peptidase aspartic, active site; Retrotransposon gag protein; Polynucleotidyl transferase, Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3 9673679-9667953 H EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01018780001 | 212 | 37.7 | 57.2 | |
| castor_bean_cds | --No_Hits-- | ||||
| castor_bean_pep | 29674.m000206 | 275 | 58.6 | 76.3 | conserved hypothetical protein |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCB0050421.20 | length: 1714 aa. | |||
| IPR000477 | RNA-directed DNA polymerase (reverse transcriptase) | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003723 | RNA binding | ||
| Molecular Function | GO:0003964 | RNA-directed DNA polymerase activity | ||
| Biological Process | GO:0006278 | RNA-dependent DNA replication | ||
| HMMPfam | PF00078 | RVT_1 | 3.7e-18 | 885-1045 |
| IPR001584 | Integrase, catalytic core | |||
| Molecular Function | GO:0003677 | DNA binding | ||
| Biological Process | GO:0015074 | DNA integration | ||
| HMMPfam | PF00665 | rve | 3.1e-22 | 1417-1526 |
| ProfileScan | PS50994 | INTEGRASE | 24.824 | 1403-1570 |
| IPR005162 | Retrotransposon gag protein | |||
| HMMPfam | PF03732 | Retrotrans_gag | 4.8e-16 | 134-227 |
| IPR012337 | Polynucleotidyl transferase, ribonuclease H fold | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| superfamily | SSF53098 | Ribonuclease | 1e-37 | 1407-1563 |
| IPR021109 | Peptidase aspartic | |||
| superfamily | SSF50630 | Acid | 3e-07 | 568-682 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 281-302 400-421 |
| Gene3D | G3DSA:3.30.420.10 | no description | 2.7e-33 | 1415-1576 |
| Gene3D | G3DSA:3.30.70.270 | no description | 7.2e-14 | 879-1045 |
| HMMPanther | PTHR10178 | GAG/POL/ENV | 0 | 105-1702 |
| HMMPanther | PTHR10178:SF14 | RETROVIRUS | 0 | 105-1702 |
| Seg | seg | seg | NA | 366-375 465-471 481-496 741-756 |
| superfamily | SSF56672 | DNA/RNA | 4.5e-154 | 809-1248 |