Jatropha Genome Database

JcCB0049821.10 (JcS_105438.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0049821
Scaffold:
JcS_105438 JcCB0713651(+) =JcCB0137701(+) =JcCB0049821(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl D3JYA1_SAPSE 786 62.4 77.5 (tr|D3JYA1) Casbene synthase OS=Sapium sebiferum PE=2 SV=1
Arabidopsis_pep AT5G23960.1 416 39.3 60.8 | Symbols: ATTPS21, TPS21 | TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene synthase/ alpha-humulene synthase | chr5:8092969-8095128 FORWARD
soybean_pep Glyma12g16990.1 389 39.3 58.5  
Medicago_pep IMGA|Medtr6g008950.1 427 40.3 61.4 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid; Terpenoid synthase chr06_pseudomolecule_IMGAG_V3 1339518-1343067 E EGN_Mt090430 20090702
grape_pep GSVIVT01014569001 456 41.4 63.6  
castor_bean_cds 30169.m006276 272 79.0 79.0 Casbene synthase, chloroplast precursor, putative
castor_bean_pep 30169.m006283 775 61.4 77.8 Casbene synthase, chloroplast precursor
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0049821.10 length: 601 aa.
IPR001906 Terpene synthase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF01397 Terpene_synth 3.7e-51 83-247
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 1e-84 278-545
IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 9.1e-65 68-273
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 1.7e-122 238-601
superfamily SSF48576 Terpenoid 1.3e-122 273-601
no_ID  
Seg seg seg NA 17-30
352-365
526-537