Jatropha Genome Database

JcCB0047491.20 (JcS_201950.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0047491
Scaffold:
JcS_201950 JcCB0323111(-) =JcCB0047491(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SLT7_RICCO 521 88.9 94.1 (tr|B9SLT7) Glycerol-3-phosphate dehydrogenase, putative OS=Ricinus communis GN=RCOM_0531780 PE=3 SV=1
Arabidopsis_pep AT5G40610.1 485 89.0 94.3 | Symbols: | glycerol-3-phosphate dehydrogenase (NAD+) / GPDH | chr5:16265071-16267258 REVERSE
soybean_pep Glyma19g07410.1 490 87.6 94.8  
Medicago_pep IMGA|Medtr6g022550.1 481 82.6 91.3 NAD-dependent glycerol-3-phosphate dehydrogenase chr06_pseudomolecule_IMGAG_V3 5053441-5060116 E EGN_Mt090430 20090702
grape_pep GSVIVT01003989001 486 86.8 95.1  
castor_bean_cds 29633.m000917 924 89.5 89.5 glycerol-3-phosphate dehydrogenase, putative
castor_bean_pep 29633.m000917 521 88.9 94.1 glycerol-3-phosphate dehydrogenase, putative
JAT_13201ests gi|268522815|gb|FM896258.1|FM896258 1059 99.5 99.5 FM896258 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003448, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0047491.20 length: 319 aa.
IPR006109 NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal
method AccNumber shortName E-value location
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Biological Process GO:0055114 oxidation reduction    
HMMPfam PF07479 NAD_Gly3P_dh_C 6.8e-30 227-301
IPR006168 NAD-dependent glycerol-3-phosphate dehydrogenase
Molecular Function GO:0004367 glycerol-3-phosphate dehydrogenase (NAD+) activity    
Biological Process GO:0006072 glycerol-3-phosphate metabolic process    
Cellular Component GO:0009331 glycerol-3-phosphate dehydrogenase complex    
Biological Process GO:0055114 oxidation reduction    
FPrintScan PR00077 GPDHDRGNASE 1.7e-63 41-58
104-131
180-200
221-245
246-270
288-305
HMMPIR PIRSF000114 Glycerol-3-phosphate 1.9e-52 35-314
HMMPanther PTHR11728 GLYCEROL-3-PHOSPHATE 6.9e-106 38-299
PatternScan PS00957 NAD_G3PDH NA 236-257
IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like
Molecular Function GO:0016491 oxidoreductase activity    
superfamily SSF48179 6-phosphogluconate 3.3e-27 227-299
IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal
Cellular Component GO:0005737 cytoplasm    
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Biological Process GO:0046168 glycerol-3-phosphate catabolic process    
Molecular Function GO:0051287 NAD or NADH binding    
Biological Process GO:0055114 oxidation reduction    
HMMPfam PF01210 NAD_Gly3P_dh_N 4.5e-51 38-206
IPR013328 Dehydrogenase, multihelical
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050662 coenzyme binding    
Gene3D G3DSA:1.10.1040.10 no description 7.4e-19 237-299
IPR016040 NAD(P)-binding domain
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005488 binding    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.720 no description 3.5e-51 22-235
superfamily SSF51735 NAD(P)-binding 3.1e-34 30-228
IPR017751 NAD-dependent glycerol-3-phosphate dehydrogenase, eukaryotic
Molecular Function GO:0004367 glycerol-3-phosphate dehydrogenase (NAD+) activity    
Molecular Function GO:0042803 protein homodimerization activity    
Molecular Function GO:0051287 NAD or NADH binding    
Biological Process GO:0055114 oxidation reduction    
HMMTigr TIGR03376 glycerol3P_DH: 4.1e-147 38-310
no_ID  
Seg seg seg NA 2-9