Jatropha Genome Database

JcCB0042121.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0042121
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S599_RICCO 660 83.9 88.7 (tr|B9S599) Argininosuccinate synthase OS=Ricinus communis GN=RCOM_0887890 PE=3 SV=1
Arabidopsis_pep AT4G24830.1 577 77.6 85.4 | Symbols: | arginosuccinate synthase family | chr4:12793085-12795857 REVERSE
soybean_pep Glyma17g13790.1 592 75.9 81.5  
Medicago_pep IMGA|Medtr5g045830.1 588 84.0 90.4 Argininosuccinate synthase chr05_pseudomolecule_IMGAG_V3 19231661-19226013 E EGN_Mt090430 20090702
grape_pep GSVIVT01008510001 589 73.9 83.1  
castor_bean_cds 29171.m000266 1130 89.7 89.7 argininosuccinate synthase, putative
castor_bean_pep 29839.m000427 660 83.9 88.7 argininosuccinate synthase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04736 541 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0042121.10 length: 434 aa.
IPR001518 Argininosuccinate synthase
method AccNumber shortName E-value location
Molecular Function GO:0004055 argininosuccinate synthase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006526 arginine biosynthetic process    
HMMPanther PTHR11587 ARGININOSUCCINATE 8.2e-173 94-392
HMMPfam PF00764 Arginosuc_synth 6.3e-128 101-392
HMMTigr TIGR00032 argG: 2.7e-131 99-432
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
Gene3D G3DSA:3.40.50.620 no description 7.4e-73 98-269
IPR018223 Argininosuccinate synthase, conserved site
Molecular Function GO:0004055 argininosuccinate synthase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006526 arginine biosynthetic process    
PatternScan PS00564 ARGININOSUCCIN_SYN_1 NA 103-111
PatternScan PS00565 ARGININOSUCCIN_SYN_2 NA 212-223
no_ID  
Gene3D G3DSA:3.90.1260.10 no description 2.4e-52 270-392
HAMAP MF_00005 ASSY_MF_00005 38.495 97-434
Seg seg seg NA 135-148
393-410
superfamily SSF52402 Adenine 6.1e-53 88-268
superfamily SSF69864 Argininosuccinate 7.3e-55 269-392