Jatropha Genome Database

JcCB0037771.30 (JcS_100834.60)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0037771
Scaffold:
JcS_100834 JcCA0020581(-) =JcCA0258491(-) =JcCB0246791(-) =JcCB0037771(+) =JcCA0003201(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q7X8F3_ORYSJ 112 25.9 42.9 (tr|Q7X8F3) OSJNBa0041M21.10 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0093P23.5 PE=4 SV=2
Arabidopsis_pep --No_Hits--        
soybean_pep Glyma08g41350.1 51.6 50.0 59.7  
Medicago_pep IMGA|Medtr3g061750.1 79.0 31.2 53.6 polyprotein, related chr03_pseudomolecule_IMGAG_V3 14038160-14037402 H EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds --No_Hits--        
castor_bean_pep 30180.m001016 70.9 33.9 57.0 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0037771.30 length: 586 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR10178 GAG/POL/ENV 1.2e-09 61-426
HMMPanther PTHR10178:SF24 RETROELEMENT 1.2e-09 61-426
Seg seg seg NA 282-291
superfamily SSF56672 DNA/RNA 4.4e-07 369-426