Jatropha Genome Database

JcCB0037361.10 (JcS_103041.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0037361
Scaffold:
JcS_103041 JcCA0151491(-) =JcCB0037361(+) =JcCA0045261(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SZ36_RICCO 344 71.9 81.0 (tr|B9SZ36) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0212730 PE=4 SV=1
Arabidopsis_pep AT4G39870.1 203 47.9 60.0 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TLDc (InterPro:IPR006571); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05590.2); Has 2018 Blast hits to 1865 proteins in 220 species: Archae - 0; Bacteria - 39; Metazoa - 1002; Fungi - 279; Plants - 129; Viruses - 34; Other Eukaryotes - 535 (source: NCBI BLink). | chr4:18502234-18504275 FORWARD
soybean_pep Glyma08g14440.6 186 49.0 58.2  
Medicago_pep IMGA|Medtr3g101690.1 168 43.0 56.6 TLDc chr03_pseudomolecule_IMGAG_V3 24659163-24662022 E EGN_Mt090430 20090702
grape_pep GSVIVT01027912001 52.8 36.3 53.8  
castor_bean_cds 28281.m000367 444 83.0 83.0 conserved hypothetical protein
castor_bean_pep 28281.m000367 344 71.9 81.0 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c07306 827 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0037361.10 length: 240 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR23354 NUCLEOLAR 4e-22 164-240
HMMPanther PTHR23354:SF5 NUCLEOLAR 4e-22 164-240
Seg seg seg NA 29-39
76-85