Jatropha Genome Database

JcCB0036891.10 (JcS_100265.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0036891
Scaffold:
JcS_100265 JcCB0100701(-) =JcCB0376161(+) =JcCB0030781(+) =JcCB0246261(+) =JcCB0331671(+) =JcCB0036891(+) =JcCB0376611(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SV81_RICCO 590 85.2 92.7 (tr|B9SV81) Isoamylase, putative OS=Ricinus communis GN=RCOM_0771320 PE=4 SV=1
Arabidopsis_pep AT2G39930.1 523 69.8 81.3 | Symbols: ISA1, ATISA1 | ISA1 (ISOAMYLASE 1); alpha-amylase/ isoamylase | chr2:16666078-16672183 FORWARD
soybean_pep Glyma08g03210.2 531 75.5 86.5  
Medicago_pep IMGA|Medtr4g160980.1 528 75.2 88.1 Alpha amylase, catalytic region; ; chr04_pseudomolecule_IMGAG_V3 40981878-40992441 E EGN_Mt090430 20090702
grape_pep GSVIVT01035168001 539 78.9 89.3  
castor_bean_cds 29776.m000488 910 88.0 88.0 isoamylase, putative
castor_bean_pep 29776.m000488 590 85.2 92.7 isoamylase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0036891.10 length: 365 aa.
IPR004193 Glycoside hydrolase, family 13, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF02922 CBM_48 7.4e-18 68-162
IPR006047 Glycosyl hydrolase, family 13, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0043169 cation binding    
HMMPfam PF00128 Alpha-amylase 3.8e-15 232-338
IPR013781 Glycoside hydrolase, subgroup, catalytic core
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0043169 cation binding    
Gene3D G3DSA:3.20.20.80 no description 9.9e-46 194-358
IPR013783 Immunoglobulin-like fold
Gene3D G3DSA:2.60.40.10 no description 6.9e-24 63-168
IPR017853 Glycoside hydrolase, catalytic core
superfamily SSF51445 (Trans)glycosidases 3.2e-51 113-360
no_ID  
HMMPanther PTHR10357 AMYLASE 2.1e-91 193-359
HMMPanther PTHR10357:SF24 ISOAMYLASE 2.1e-91 193-359