Jatropha Genome Database

JcCB0034881.20 (JcS_100115.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0034881
Scaffold:
JcS_100115 JcCA0108651(-) =JcCA0140011(+) =JcCB0454511(+) =JcPR02GBD9G(-) =JcCB0581961(+) =JcCB0034881(-) =JcCD0187175(+) =JcCD0100800(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RCT9_RICCO 248 89.6 90.3 (tr|B9RCT9) Dynamin, putative OS=Ricinus communis GN=RCOM_1692160 PE=3 SV=1
Arabidopsis_pep AT5G42080.1 234 83.6 88.8 | Symbols: ADL1, ADL1A, AG68, DRP1A, RSW9 | ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding / GTPase/ protein binding | chr5:16820661-16824536 REVERSE
soybean_pep Glyma01g43550.1 244 88.8 89.6  
Medicago_pep IMGA|Medtr5g009190.1 229 83.0 87.4 Dynamin central region; Dynamin; Dynamin GTPase effector chr05_pseudomolecule_IMGAG_V3 1949615-1944184 E EGN_Mt090430 20090702
grape_pep GSVIVT01019546001 234 85.8 88.1  
castor_bean_cds 30190.m010847 490 90.3 90.3 dynamin, putative
castor_bean_pep 30190.m010847 248 89.6 90.3 dynamin, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c08706 799 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0034881.20 length: 157 aa.
IPR001401 Dynamin, GTPase domain
method AccNumber shortName E-value location
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00195 DYNAMIN 4.2e-21 34-52
59-76
HMMPfam PF00350 Dynamin_N 1.1e-28 37-134
HMMSmart SM00053 no description 2.8e-11 1-156
IPR019762 Dynamin, GTPase region, conserved site
PatternScan PS00410 DYNAMIN NA 60-69
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.6e-34 2-134
HMMPanther PTHR11566 DYNAMIN 1.8e-78 1-134
HMMPanther PTHR11566:SF12 DYNAMIN 1.8e-78 1-134
Seg seg seg NA 39-50
superfamily SSF52540 P-loop 1e-11 35-134