| JcS_104598 | JcCB0034461(-) =JcCB0183891(-) =JcCA0274511(+) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9RF13_RICCO | 785 | 76.2 | 86.4 | (tr|B9RF13) Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1430310 PE=4 SV=1 |
| Arabidopsis_pep | AT3G56030.1 | 325 | 46.0 | 71.0 | | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G40240.1); Has 6707 Blast hits to 2251 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi - 13; Plants - 6562; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). | chr3:20791259-20792314 FORWARD |
| soybean_pep | Glyma09g28570.1 | 268 | 45.0 | 63.2 | |
| Medicago_pep | IMGA|Medtr6g071000.1 | 234 | 38.9 | 60.2 | Pentatricopeptide repeat chr06_pseudomolecule_IMGAG_V3 13580088-13581124 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01032781001 | 372 | 58.3 | 75.5 | |
| castor_bean_cds | 30128.m008727 | 856 | 82.6 | 82.6 | pentatricopeptide repeat-containing protein, putative |
| castor_bean_pep | 30128.m008727 | 785 | 76.2 | 86.4 | pentatricopeptide repeat-containing protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCB0034461.20 | length: 500 aa. | |||
| IPR002885 | Pentatricopeptide repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF01535 | PPR | 0.013 | 38-56 278-302 313-342 348-375 383-410 453-481 |
| HMMTigr | TIGR00756 | PPR: | 0.00073 | 277-311 312-346 347-381 382-416 452-486 |
| ProfileScan | PS51375 | PPR | 9.010 | 275-309 310-344 345-379 380-414 450-484 |
| IPR007379 | Mitochondrial inner membrane translocase complex, subunit Tim44-related | |||
| Cellular Component | GO:0005744 | mitochondrial inner membrane presequence translocase complex | ||
| Biological Process | GO:0006886 | intracellular protein transport | ||
| Molecular Function | GO:0015450 | P-P-bond-hydrolysis-driven protein transmembrane transporter activity | ||
| HMMPfam | PF04280 | Tim44 | 4.1e-26 | 27-154 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 70-91 |
| HMMPanther | PTHR10483 | PENTATRICOPEPTIDE | 1.8e-42 | 205-485 |
| superfamily | SSF48452 | TPR-like | 2.1e-09 | 276-477 |