Jatropha Genome Database

JcCB0033901.20 (JcS_100049.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0033901
Scaffold:
JcS_100049 JcCA0116171(-) =JcCB0083791(+) =JcCB0601571(+) =JcCB0964531(-) =JcCB0033901(-) =JcCB0164571(-) =JcCB0240501(+) =JcPR03DXLSD(-) =JcCA0154191(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SKH8_RICCO 994 94.6 97.5 (tr|B9SKH8) Dynamin, putative OS=Ricinus communis GN=RCOM_0658880 PE=3 SV=1
Arabidopsis_pep AT3G60190.1 915 83.0 93.8 | Symbols: ADL4, ADLP2, EDR3, DRP1E, ADL1E | ADL1E (ARABIDOPSIS DYNAMIN-LIKE 1E); GTP binding / GTPase | chr3:22244367-22247651 REVERSE
soybean_pep Glyma07g12850.1 969 90.1 96.3  
Medicago_pep IMGA|Medtr8g009280.1 924 85.5 92.3 Dynamin central region; Dynamin; Dynamin GTPase effector chr08_pseudomolecule_IMGAG_V3 1289979-1297612 F EGN_Mt090430 20090702
grape_pep GSVIVT01018380001 979 91.1 97.1  
castor_bean_cds 29709.m001211 1602 88.0 88.0 dynamin, putative
castor_bean_pep 29709.m001211 994 94.6 97.5 dynamin, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c02276 1348 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0033901.20 length: 524 aa.
IPR000375 Dynamin central region
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
HMMPfam PF01031 Dynamin_M 3.1e-70 132-401
IPR001401 Dynamin, GTPase domain
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00195 DYNAMIN 2.3e-34 42-59
92-110
111-127
134-153
HMMPfam PF00350 Dynamin_N 2.6e-29 12-123
HMMSmart SM00053 no description 2.9e-33 1-161
IPR003130 Dynamin GTPase effector
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
HMMPfam PF02212 GED 7.8e-23 429-520
HMMSmart SM00302 no description 5.6e-36 427-520
IPR020850 GTPase effector domain, GED
ProfileScan PS51388 GED 22.539 432-524
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.8e-69 9-230
HMMPanther PTHR11566 DYNAMIN 1.2e-216 13-520
HMMPanther PTHR11566:SF12 DYNAMIN 1.2e-216 13-520
superfamily SSF52540 P-loop 2.1e-29 13-221