Jatropha Genome Database

JcCB0033501.20  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0033501
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q9AU17_SOLCI 103 34.5 52.7 (tr|Q9AU17) Polyprotein-like OS=Solanum chilense PE=4 SV=1
Arabidopsis_pep --No_Hits--        
soybean_pep Glyma15g42470.1 74.7 29.0 46.7  
Medicago_pep IMGA|Medtr5g089840.1 125 48.8 65.4 copia LTR rider, related chr05_pseudomolecule_IMGAG_V3 34952559-34951978 H EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0033501.20 length: 251 aa.
IPR001878 Zinc finger, CCHC-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF00098 zf-CCHC 2e-07 225-241
HMMSmart SM00343 no description 2.6e-05 225-241
ProfileScan PS50158 ZF_CCHC 10.642 226-241
no_ID  
Seg seg seg NA 87-100
213-223
superfamily SSF57756 Retrovirus 2e-06 3-241