| JcS_100027 | JcCA0004722(+) =JcCA0309351(-) =JcCA0192231(+) =JcCA0095121(+) =JcCB0277631(+) =JcCB0286801(+) =JcCB0033401(-) =JcCA0245291(+) =JcCA0304521(+) =JcCA0144471(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9SAB6_RICCO | 510 | 59.3 | 73.0 | (tr|B9SAB6) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1236940 PE=4 SV=1 |
| Arabidopsis_pep | AT5G58130.1 | 235 | 50.0 | 59.6 | | Symbols: | RNA recognition motif (RRM)-containing protein | chr5:23521190-23523766 REVERSE |
| soybean_pep | Glyma09g10320.1 | 277 | 42.1 | 57.9 | |
| Medicago_pep | IMGA|Medtr2g055570.1 | 261 | 40.5 | 59.2 | Pyridoxal-dependent decarboxylase; Nucleotide-binding, alpha-beta plait chr02_pseudomolecule_IMGAG_V3 14910289-14915688 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01038350001 | 337 | 47.7 | 62.4 | |
| castor_bean_cds | 30018.m000545 | 206 | 79.4 | 79.4 | conserved hypothetical protein |
| castor_bean_pep | 30018.m000545 | 510 | 59.3 | 73.0 | conserved hypothetical protein |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCB0033401.10 | length: 753 aa. | |||
| IPR000504 | RNA recognition motif, RNP-1 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| HMMPfam | PF00076 | RRM_1 | 3.2e-07 | 12-79 |
| HMMSmart | SM00360 | no description | 6.7e-08 | 11-83 |
| ProfileScan | PS50102 | RRM | 12.577 | 10-87 |
| IPR012677 | Nucleotide-binding, alpha-beta plait | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Gene3D | G3DSA:3.30.70.330 | no description | 9.2e-09 | 7-87 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 535-556 |
| HMMPanther | PTHR23099 | TRANSCRIPTIONAL | 4.5e-37 | 35-445 |
| Seg | seg | seg | NA | 104-117 383-407 533-541 599-606 |
| superfamily | SSF54928 | RNA-binding | 2.7e-13 | 2-161 |