| JcS_103578 | JcCA0038111(-) =JcCB0032671(-) =JcCB0381561(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9SUT3_RICCO | 441 | 63.7 | 71.7 | (tr|B9SUT3) U1 small nuclear ribonucleoprotein 70 kD, putative OS=Ricinus communis GN=RCOM_0574500 PE=4 SV=1 |
| Arabidopsis_pep | AT2G43370.1 | 340 | 64.5 | 74.8 | | Symbols: | U1 small nuclear ribonucleoprotein 70 kDa, putative | chr2:18013431-18015376 FORWARD |
| soybean_pep | Glyma08g48140.1 | 380 | 61.3 | 72.1 | |
| Medicago_pep | IMGA|Medtr7g093350.1 | 364 | 73.7 | 84.8 | Nucleotide-binding, alpha-beta plait chr07_pseudomolecule_IMGAG_V3 20909795-20905967 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01010733001 | 410 | 65.2 | 75.2 | |
| castor_bean_cds | 29657.m000467 | 581 | 84.7 | 84.7 | U1 small nuclear ribonucleoprotein 70 kD, putative |
| castor_bean_pep | 29657.m000467 | 441 | 63.7 | 71.7 | U1 small nuclear ribonucleoprotein 70 kD, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCB0032671.10 | length: 349 aa. | |||
| IPR000504 | RNA recognition motif, RNP-1 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| HMMPfam | PF00076 | RRM_1 | 1.2e-17 | 63-132 |
| HMMSmart | SM00360 | no description | 4.3e-18 | 62-135 |
| ProfileScan | PS50102 | RRM | 16.671 | 61-139 |
| IPR012677 | Nucleotide-binding, alpha-beta plait | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Gene3D | G3DSA:3.30.70.330 | no description | 9.8e-24 | 58-172 |
| no_ID | ||||
| HMMPanther | PTHR13952 | U1 | 6.8e-66 | 8-349 |
| Seg | seg | seg | NA | 148-157 229-243 326-349 |
| superfamily | SSF54928 | RNA-binding | 7.4e-23 | 26-170 |