Jatropha Genome Database

JcCB0032041.10 (JcS_107527.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0032041
Scaffold:
JcS_107527 JcCA0296911(+) =JcCB0032041(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl D7SXC8_VITVI 480 62.9 75.8 (tr|D7SXC8) Whole genome shotgun sequence of line PN40024, scaffold_108.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011424001 PE=4 SV=1
Arabidopsis_pep AT1G26810.1 374 51.5 66.8 | Symbols: GALT1 | GALT1 (GALACTOSYLTRANSFERASE1); UDP-galactose:N-glycan beta-1,3-galactosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | chr1:9286862-9289327 REVERSE
soybean_pep Glyma02g12030.1 436 57.7 70.9  
Medicago_pep IMGA|Medtr5g044460.1 440 57.6 71.1 Glycosyl transferase, family 31; Concanavalin A-like lectin/glucanase chr05_pseudomolecule_IMGAG_V3 18469301-18475327 E EGN_Mt090430 20090702
grape_pep GSVIVT01011424001 480 62.9 75.8  
castor_bean_cds 28838.m000256 515 81.6 81.6 transferase, transferring glycosyl groups, putative
castor_bean_pep 28838.m000256 480 63.6 76.2 transferase, transferring glycosyl groups, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0032041.10 length: 406 aa.
IPR001079 Galectin, carbohydrate recognition domain
method AccNumber shortName E-value location
Molecular Function GO:0005529 sugar binding    
HMMPanther PTHR11346 GALECTIN 5.8e-07 172-360
HMMPfam PF00337 Gal-bind_lectin 9.9e-37 168-359
HMMSmart SM00276 no description 0.00044 166-361
ProfileScan PS51304 GALECTIN 36.113 168-361
IPR008985 Concanavalin A-like lectin/glucanase
superfamily SSF49899 Concanavalin 4.2e-25 168-372
IPR013320 Concanavalin A-like lectin/glucanase, subgroup
Gene3D G3DSA:2.60.120.200 no description 8.7e-05 166-247
301-358
no_ID  
Seg seg seg NA 10-22
201-214
280-299