Jatropha Genome Database

JcCB0030711.30 (JcS_100341.90)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0030711
Scaffold:
JcS_100341 JcCB0696091(+) =JcCB0204821(-) =JcCA0317481(-) =JcCB0030711(+) =JcCA0260771(+) =JcCB0333061(+) =JcCB0707071(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SYY0_RICCO 368 71.7 79.2 (tr|B9SYY0) Trigger factor, putative OS=Ricinus communis GN=RCOM_0546740 PE=4 SV=1
Arabidopsis_pep AT5G55220.1 253 61.9 85.1 | Symbols: | trigger factor type chaperone family protein | chr5:22397677-22400678 FORWARD
soybean_pep Glyma14g02220.2 303 57.6 70.5  
Medicago_pep IMGA|Medtr5g101240.1 271 70.0 84.4 Bacterial trigger factor, C-terminal chr05_pseudomolecule_IMGAG_V3 40502851-40507905 E EGN_Mt090430 20090702
grape_pep GSVIVT01037722001 302 65.9 76.7  
castor_bean_cds 29640.m000411 525 88.2 88.2 Trigger factor, putative
castor_bean_pep 29640.m000411 368 71.7 79.2 Trigger factor, putative
JAT_13201ests gi|268524672|gb|FM895370.1|FM895370 668 96.1 96.1 FM895370 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002178, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0030711.30 length: 265 aa.
IPR008881 Trigger factor, ribosome-binding, bacterial
method AccNumber shortName E-value location
Biological Process GO:0006457 protein folding    
Biological Process GO:0015031 protein transport    
Gene3D G3DSA:3.30.70.1050 no description 2.1e-08 89-212
HMMPfam PF05697 Trigger_N 2e-25 94-239
superfamily SSF102735 Trigger 1e-19 92-229
no_ID  
Seg seg seg NA 70-84