Jatropha Genome Database

JcCB0028471.10 (JcS_100119.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0028471
Scaffold:
JcS_100119 JcCA0150641(-) =JcCB0028471(+) =JcCA0120941(+) =JcCB0229371(-) =JcCB0163021(-) =JcPR04FY8PZ(+) =JcCB0219141(-) =JcCB1006961(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RET4_RICCO 572 88.3 90.8 (tr|B9RET4) Cysteine synthase OS=Ricinus communis GN=RCOM_1428580 PE=3 SV=1
Arabidopsis_pep AT4G14880.2 504 76.0 86.8 | Symbols: OASA1, CYTACS1, ATCYS-3A | OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1); cysteine synthase | chr4:8518209-8520050 REVERSE
soybean_pep Glyma19g43150.1 559 85.2 89.5  
Medicago_pep IMGA|Medtr1g096590.1 554 85.5 90.1 Pyridoxal-5-phosphate-dependent enzyme, beta subunit chr01_pseudomolecule_IMGAG_V3 19782590-19786142 E EGN_Mt090430 20090702
grape_pep GSVIVT01021867001 551 86.5 91.1  
castor_bean_cds 30128.m008638 1193 90.5 90.5 cysteine synthase, putative
castor_bean_pep 30128.m008638 572 88.3 90.8 cysteine synthase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04107 1679 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0028471.10 length: 325 aa.
IPR001216 Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site
method AccNumber shortName E-value location
Biological Process GO:0006535 cysteine biosynthetic process from serine    
PatternScan PS00901 CYS_SYNTHASE NA 38-56
IPR001926 Pyridoxal phosphate-dependent enzyme, beta subunit
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00291 PALP 4.8e-59 13-299
superfamily SSF53686 Tryptophan 2.9e-94 7-311
IPR005856 Cysteine synthase K/M
Molecular Function GO:0004124 cysteine synthase activity    
Biological Process GO:0006535 cysteine biosynthetic process from serine    
HMMTigr TIGR01136 cysKM: 2.7e-212 12-311
IPR005859 Cysteine synthase A
Molecular Function GO:0004124 cysteine synthase activity    
Biological Process GO:0006535 cysteine biosynthetic process from serine    
HMMTigr TIGR01139 cysK: 8.7e-222 12-311
no_ID  
Gene3D G3DSA:3.40.50.1100 no description 1e-69 124-309
HMMPanther PTHR10314 SER/THR 9.6e-152 29-324
HMMPanther PTHR10314:SF8 CYSTEINE 9.6e-152 29-324
Seg seg seg NA 182-193
275-284