Jatropha Genome Database

JcCB0028271.30 (JcS_100720.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0028271
Scaffold:
JcS_100720 JcCB0902031(-) =JcCA0268211(-) =JcCA0152031(-) =JcCB0028271(-) =JcCA0311281(-) =JcCB0466631(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9R8Q3_RICCO 842 66.5 74.9 (tr|B9R8Q3) Calcium ion binding protein, putative OS=Ricinus communis GN=RCOM_1601620 PE=4 SV=1
Arabidopsis_pep AT1G20760.1 521 47.6 58.4 | Symbols: | calcium-binding EF hand family protein | chr1:7209515-7214773 FORWARD
soybean_pep Glyma06g01930.1 618 53.4 63.7  
Medicago_pep IMGA|Medtr5g106770.1 408 41.8 54.3 EPS15 homology (EH) chr05_pseudomolecule_IMGAG_V3 43009628-43020393 E EGN_Mt090430 20090702
grape_pep GSVIVT01013392001 585 51.5 60.7  
castor_bean_cds 30170.m014228 745 84.4 84.4 calcium ion binding protein, putative
castor_bean_pep 30170.m014228 842 66.5 74.9 calcium ion binding protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c08252 1100 99.5 99.5  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0028271.30 length: 672 aa.
IPR000261 EPS15 homology (EH)
method AccNumber shortName E-value location
HMMSmart SM00027 no description 6.9e-23 2-97
401-497
ProfileScan PS50031 EH 19.934 9-99
408-491
IPR002048 Calcium-binding EF-hand
Molecular Function GO:0005509 calcium ion binding    
HMMSmart SM00054 no description 4.5 12-40
46-74
411-439
445-473
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 6.9e-22 7-99
396-490
IPR018249 EF-HAND 2
ProfileScan PS50222 EF_HAND_2 7.874 8-43
44-77
407-442
444-476
no_ID  
HMMPanther PTHR11216 EH 2.8e-146 8-672
HMMPanther PTHR11216:SF12 INTERSECTIN-RELATED 2.8e-146 8-672
Seg seg seg NA 95-105
158-173
367-389
451-463
superfamily SSF47473 EF-hand 8.6e-19 401-498
9-96