Jatropha Genome Database

JcCB0027381.10 (JcS_100623.70)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0027381
Scaffold:
JcS_100623 JcCB0477071(+) =JcCB0231591(+) =JcCA0068901(+) =JcCA0307381(+) =JcCA0312531(+) =JcCB0027381(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RNV4_RICCO 244 85.3 90.4 (tr|B9RNV4) Endosomal P24A protein, putative OS=Ricinus communis GN=RCOM_0920870 PE=4 SV=1
Arabidopsis_pep AT5G10840.1 217 75.0 83.3 | Symbols: | endomembrane protein 70, putative | chr5:3424910-3427797 REVERSE
soybean_pep Glyma06g06460.1 220 84.5 92.2  
Medicago_pep IMGA|Medtr1g016840.1 204 76.7 88.3 Nonaspanin (TM9SF) chr01_pseudomolecule_IMGAG_V3 3413003-3417428 E EGN_Mt090430 20090702
grape_pep GSVIVT01035970001 216 80.9 92.2  
castor_bean_cds 29848.m004535 379 88.8 88.8 Endosomal P24A protein precursor, putative
castor_bean_pep 29848.m004535 244 85.3 90.4 Endosomal P24A protein precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c02300 555 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0027381.10 length: 137 aa.
IPR004240 Nonaspanin (TM9SF)
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
HMMPanther PTHR10766 TRANSMEMBRANE 5.3e-66 15-135
HMMPfam PF02990 EMP70 1.1e-22 61-136
no_ID  
HMMPanther PTHR10766:SF12 TRANSMEMBRANE 5.3e-66 15-135