Jatropha Genome Database

JcCB0027041.10 (JcS_100035.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0027041
Scaffold:
JcS_100035 JcCB0193021(+) =JcCB0110131(-) =JcCB0588851(-) =JcCB0097241(-) =JcCA0262331(-) =JcCB0027041(-) =JcCB0068881(-) =JcCB0110871(-) =JcCB0907471(+) =JcCA0165421(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RYW1_RICCO 649 87.9 92.7 (tr|B9RYW1) Glucan endo-1,3-beta-glucosidase, putative OS=Ricinus communis GN=RCOM_1314040 PE=3 SV=1
Arabidopsis_pep AT1G32860.1 506 68.3 84.0 | Symbols: | glycosyl hydrolase family 17 protein | chr1:11907308-11908803 REVERSE
soybean_pep Glyma10g31550.1 545 80.2 88.4  
Medicago_pep IMGA|Medtr2g107740.1 423 61.1 79.9 Glycoside hydrolase, family 17 chr02_pseudomolecule_IMGAG_V3 25417547-25415071 F EGN_Mt090430 20090702
grape_pep GSVIVT01019678001 456 65.0 74.3  
castor_bean_cds 30068.m002597 458 80.9 80.9 Glucan endo-1,3-beta-glucosidase precursor, putative
castor_bean_pep 30068.m002597 649 87.9 92.7 Glucan endo-1,3-beta-glucosidase precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c12852 1076 99.5 99.5  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0027041.10 length: 393 aa.
IPR000490 Glycoside hydrolase, family 17
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF00332 Glyco_hydro_17 1.8e-95 28-344
IPR013781 Glycoside hydrolase, subgroup, catalytic core
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0043169 cation binding    
Gene3D G3DSA:3.20.20.80 no description 2.5e-114 28-346
IPR017853 Glycoside hydrolase, catalytic core
superfamily SSF51445 (Trans)glycosidases 3.4e-109 28-346
no_ID  
Seg seg seg NA 356-382