Jatropha Genome Database

JcCB0023821.10

Related links:

GeneModel

Predicted Sequence Links:

Genome Sequence: JcCB0023821

Full length sequence(10726 bp)
Sequence Cut

Init: Term:
reverse complement

Scaffold:

No data.

Results of Blast2 searches (The best-hits are tabulated.):

database	Accession	Score	Iden (%)	Posi (%)	Definition
trembl	B9GYR0_POPTR	588	91.9	93.2	(tr\|B9GYR0) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_852855 PE=4 SV=1
Arabidopsis_pep	AT5G67380.1	571	88.0	91.9	\| Symbols: CKA1, ATCKA1 \| CKA1 (CASEIN KINASE ALPHA 1); kinase \| chr5:26881156-26883383 REVERSE
soybean_pep	Glyma17g17790.1	591	92.2	93.2
Medicago_pep	IMGA\|Medtr8g099310.1	585	91.6	93.2	Tyrosine protein kinase chr08_pseudomolecule_IMGAG_V3 21815215-21809505 E EGN_Mt090430 20090702
grape_pep	GSVIVT01000149001	580	90.9	92.5
castor_bean_cds	29172.m000214	1096	92.7	92.7	casein kinase II, alpha chain, putative
castor_bean_pep	29661.m000905	534	82.1	88.3	casein kinase II, alpha chain, putative
JAT_13201ests	gi\|268522597\|gb\|FM896638.1\|FM896638	1003	98.2	98.2	FM896638 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003908, mRNA sequence
KJC_r1	KJC_c01331	289	81.1	81.1

A list of protein families, domains and functional sites (searches in InterPro)

IPR000719	Protein kinase, catalytic domain
JcCB0023821.10				length: 373 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0004672	protein kinase activity
Molecular Function	GO:0005524	ATP binding
Biological Process	GO:0006468	protein amino acid phosphorylation
ProfileScan	PS50011	PROTEIN_KINASE_DOM	43.015	74-359
IPR002290	Serine/threonine-protein kinase domain
Molecular Function	GO:0004674	protein serine/threonine kinase activity
Molecular Function	GO:0005524	ATP binding
Biological Process	GO:0006468	protein amino acid phosphorylation
HMMSmart	SM00220	no description	2.3e-75	74-359
IPR008271	Serine/threonine-protein kinase, active site
Molecular Function	GO:0004674	protein serine/threonine kinase activity
Biological Process	GO:0006468	protein amino acid phosphorylation
PatternScan	PS00108	PROTEIN_KINASE_ST	NA	187-199
IPR011009	Protein kinase-like domain
superfamily	SSF56112	Protein	6.5e-79	42-368
IPR017441	Protein kinase, ATP binding site
Molecular Function	GO:0004672	protein kinase activity
Molecular Function	GO:0005524	ATP binding
Biological Process	GO:0006468	protein amino acid phosphorylation
PatternScan	PS00107	PROTEIN_KINASE_ATP	NA	80-103
IPR017442	Serine/threonine-protein kinase-like domain
Molecular Function	GO:0004672	protein kinase activity
Molecular Function	GO:0005524	ATP binding
Biological Process	GO:0006468	protein amino acid phosphorylation
HMMPfam	PF00069	Pkinase	2.2e-61	74-359
IPR020635	Tyrosine-protein kinase, catalytic domain
HMMSmart	SM00219	no description	8.8e-06	74-359
no_ID
Gene3D	G3DSA:1.10.510.10	no description	2.3e-59	135-372
HMMPanther	PTHR11295	CDC2,	3.2e-176	66-284
HMMPanther	PTHR11295:SF37	CASEIN	3.2e-176	66-284
Seg	seg	seg	NA	50-62 101-119