Jatropha Genome Database

JcCB0022671.10 (JcS_100024.120)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0022671
Scaffold:
JcS_100024 JcCA0019701(+) =JcCD0071482(-) =JcCD0058471(-) =JcCB0387971(+) =JcCB0022671(-) =JcCA0224481(+) =JcCA0302271(-) =JcCB0394631(+) =JcCA0299231(+) =JcCB0360521(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S3Y9_RICCO 648 77.8 86.3 (tr|B9S3Y9) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0557140 PE=3 SV=1
Arabidopsis_pep AT4G03090.1 204 38.5 52.5 | Symbols: | sequence-specific DNA binding / transcription factor | chr4:1366495-1370937 REVERSE
soybean_pep Glyma15g04700.1 412 55.3 69.5  
Medicago_pep IMGA|Medtr2g114320.1 315 47.1 60.7 Homeobox chr02_pseudomolecule_IMGAG_V3 26999416-27005254 E EGN_Mt090430 20090702
grape_pep GSVIVT01011024001 396 54.0 63.3  
castor_bean_cds 29647.m002049 716 82.4 82.4 conserved hypothetical protein
castor_bean_pep 29647.m002049 648 77.8 86.3 conserved hypothetical protein
JAT_13201ests gi|268525022|gb|FM895664.1|FM895664 394 100.0 100.0 FM895664 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002625, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0022671.10 length: 423 aa.
IPR001356 Homeobox
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMSmart SM00389 no description 0.0011 196-265
ProfileScan PS50071 HOMEOBOX_2 10.042 194-261
no_ID  
Coil coil coiled-coil NA 88-109