Jatropha Genome Database

JcCB0021881.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0021881
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9I7E1_POPTR 887 74.8 82.7 (tr|B9I7E1) GRAS family transcription factor OS=Populus trichocarpa GN=GRAS56 PE=4 SV=1
Arabidopsis_pep AT5G48150.2 497 63.3 78.0 | Symbols: PAT1 | PAT1 (phytochrome a signal transduction 1); signal transducer/ transcription factor | chr5:19522497-19524053 REVERSE
soybean_pep Glyma13g36120.1 814 72.0 81.6  
Medicago_pep IMGA|Medtr2g096350.1 797 68.4 78.6 GRAS transcription factor chr02_pseudomolecule_IMGAG_V3 22288858-22285703 E EGN_Mt090430 20090702
grape_pep GSVIVT01037777001 514 55.3 70.6  
castor_bean_cds 28166.m001040 535 83.1 83.1 Chitin-inducible gibberellin-responsive protein, putative
castor_bean_pep 27613.m000642 517 63.2 79.4 Chitin-inducible gibberellin-responsive protein, putative
JAT_13201ests gi|262090893|gb|GT229251.1|GT229251 470 100.0 100.0 JC816 Jatropha seeds from fruits at three stages of maturation Jatropha curcas cDNA clone PL20SE.E11.scf 5', mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0021881.10 length: 568 aa.
IPR005202 Transcription factor GRAS
method AccNumber shortName E-value location
HMMPfam PF03514 GRAS 3.7e-127 198-567
ProfileScan PS50985 GRAS 64.389 172-549
no_ID  
Seg seg seg NA 16-28
76-87