Jatropha Genome Database

JcCB0019891.20 (JcS_100267.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0019891
Scaffold:
JcS_100267 JcCB0113691(+) =JcCB0052451(+) =JcCB0187481(+) =JcCB0828941(+) =JcCB0019891(-) =JcCA0142841(-) =JcCB0614461(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl C0LE73_9ROSI 96.3 74.7 77.3 (tr|C0LE73) Photosystem I P700 chlorophyll a apoprotein OS=Jatropha curcas GN=psaB PE=3 SV=1
Arabidopsis_pep ATCG00340.1 90.5 69.3 74.7 | Symbols: PSAB | Encodes the D1 subunit of photosystem I and II reaction centers. | chrC:37375-39579 REVERSE
soybean_pep --No_Hits--        
Medicago_pep IMGA|Medtr3g043620.1 92.4 70.7 76.0 Photosystem I psaA and psaB chr03_pseudomolecule_IMGAG_V3 11980106-11984680 E EGN_Mt090430 20090702
grape_pep --No_Hits--        
castor_bean_cds 29852.m001993 105 88.3 88.3 conserved hypothetical protein
castor_bean_pep 29852.m001993 92.0 70.7 74.7 conserved hypothetical protein
JAT_13201ests gi|268518152|gb|FM888426.1|FM888426 121 88.7 88.7 FM888426 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001842, mRNA sequence
KJC_r1 KJC_c00031 127 80.9 80.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0019891.20 length: 66 aa.
IPR001280 Photosystem I, PsaA/PsaB
method AccNumber shortName E-value location
Cellular Component GO:0009522 photosystem I    
Cellular Component GO:0009579 thylakoid    
Biological Process GO:0015979 photosynthesis    
Cellular Component GO:0016021 integral to membrane    
HMMPfam PF00223 PsaA_PsaB 1.2e-05 2-66