Jatropha Genome Database

JcCB0018541.10 (JcS_100896.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0018541
Scaffold:
JcS_100896 JcCA0279211(-) =JcCB0061061(-) =JcCB0200941(-) =JcCB0018541(-) =JcCB0017001(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9T6N8_RICCO 262 69.7 77.0 (tr|B9T6N8) Indole-3-acetic acid-amido synthetase GH3.5, putative OS=Ricinus communis GN=RCOM_0236810 PE=4 SV=1
Arabidopsis_pep AT2G46370.2 229 57.3 75.3 | Symbols: JAR1, FIN219 | JAR1 (JASMONATE RESISTANT 1); ATP binding / adenylyltransferase/ catalytic/ jasmonate-amino synthetase | chr2:19034342-19036369 FORWARD
soybean_pep Glyma19g44310.1 253 68.0 77.0  
Medicago_pep IMGA|Medtr8g040380.1 164 54.1 65.0 GH3 auxin-responsive promoter chr08_pseudomolecule_IMGAG_V3 8648867-8649948 E EGN_Mt090430 20090702
grape_pep GSVIVT01027057001 242 65.7 77.0  
castor_bean_cds 28355.m000098 246 81.1 81.1 Indole-3-acetic acid-amido synthetase GH3.5, putative
castor_bean_pep 28355.m000098 262 69.7 77.0 Indole-3-acetic acid-amido synthetase GH3.5, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c12804 965 99.2 99.2  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0018541.10 length: 178 aa.
IPR004993 GH3 auxin-responsive promoter
method AccNumber shortName E-value location
HMMPfam PF03321 GH3 4.3e-52 1-156
no_ID  
Seg seg seg NA 50-59
158-172