Jatropha Genome Database

JcCB0017171.20 (JcS_102281.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0017171
Scaffold:
JcS_102281 JcCB0384311(+) =JcCB0211161(-) =JcCB0017171(-) =JcCA0079341(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RNP6_RICCO 275 75.6 82.4 (tr|B9RNP6) Cyclic nucleotide-gated ion channel, putative OS=Ricinus communis GN=RCOM_0919490 PE=4 SV=1
Arabidopsis_pep AT2G24610.1 211 69.2 80.8 | Symbols: ATCNGC14, CNGC14 | ATCNGC14; calmodulin binding / cyclic nucleotide binding / ion channel | chr2:10457105-10460351 FORWARD
soybean_pep Glyma06g08170.1 208 63.8 79.6  
Medicago_pep IMGA|Medtr3g133160.1 221 62.6 76.0 Cyclic nucleotide-binding; Ion transport protein chr03_pseudomolecule_IMGAG_V3 33670090-33666246 H EGN_Mt090430 20090702
grape_pep GSVIVT01032309001 211 67.1 82.6  
castor_bean_cds 29848.m004476 339 84.4 84.4 Cyclic nucleotide-gated ion channel, putative
castor_bean_pep 29848.m004476 275 75.6 82.4 Cyclic nucleotide-gated ion channel, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0017171.20 length: 183 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR10217 VOLTAGE 2.9e-49 47-181
HMMPanther PTHR10217:SF7 CYCLIC 2.9e-49 47-181
superfamily SSF81324 Voltage-gated 1e-11 54-176