Jatropha Genome Database

JcCB0016381.20 (JcS_100610.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0016381
Scaffold:
JcS_100610 JcCB0448501(-) =JcCA0081101(-) =JcCB0016381(-) =JcCA0141541(-) =JcCB0202431(+) =JcCB0451941(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9IKZ8_POPTR 909 80.2 88.0 (tr|B9IKZ8) Plant synaptotagmin OS=Populus trichocarpa GN=NTMC2T2.3 PE=4 SV=1
Arabidopsis_pep AT5G11100.1 834 73.3 84.5 | Symbols: SYTD, ATSYTD, NTMC2TYPE2.2, NTMC2T2.2 | SYTD | chr5:3532402-3535221 FORWARD
soybean_pep Glyma06g07030.1 835 73.7 85.8  
Medicago_pep IMGA|Medtr8g121700.1 803 69.6 82.8 C2 chr08_pseudomolecule_IMGAG_V3 28288546-28295607 E EGN_Mt090430 20090702
grape_pep GSVIVT01035883001 875 77.1 86.4  
castor_bean_cds 29848.m004598 1241 86.2 86.2 calcium lipid binding protein, putative
castor_bean_pep 29848.m004598 903 81.2 86.6 calcium lipid binding protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04377 167 83.1 83.1  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0016381.20 length: 574 aa.
IPR000008 C2 calcium-dependent membrane targeting
method AccNumber shortName E-value location
HMMPfam PF00168 C2 2.5e-24 274-357
450-531
HMMSmart SM00239 no description 2.8e-23 273-373
449-547
IPR008973 C2 calcium/lipid-binding domain, CaLB
superfamily SSF49562 C2 7.9e-32 382-558
244-400
IPR018029 C2 membrane targeting protein
ProfileScan PS50004 C2 17.190 259-358
435-532
IPR020477 C2 region
FPrintScan PR00360 C2DOMAIN 1.2e-06 465-477
491-504
513-521
no_ID  
Gene3D G3DSA:2.60.40.150 no description 1e-32 270-393
446-567
HMMPanther PTHR10774 CALCIUM-DEPENDENT 5.9e-185 22-572
HMMPanther PTHR10774:SF2 CALCIUM 5.9e-185 22-572
Seg seg seg NA 1-22
417-432