Jatropha Genome Database

JcCB0014741.10 (JcS_108572.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0014741
Scaffold:
JcS_108572 JcCB0014741(-) =JcSR201621f(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S1N2_RICCO 535 54.5 68.2 (tr|B9S1N2) Casbene synthase, chloroplast, putative OS=Ricinus communis GN=RCOM_0866620 PE=4 SV=1
Arabidopsis_pep AT3G14520.1 320 35.7 55.4 | Symbols: | terpene synthase/cyclase family protein | chr3:4875868-4878243 REVERSE
soybean_pep Glyma12g16990.1 307 35.6 55.3  
Medicago_pep IMGA|Medtr5g081360.1 310 36.5 56.7 Terpene synthase-like; Terpenoid synthase chr05_pseudomolecule_IMGAG_V3 30559952-30563990 E EGN_Mt090430 20090702
grape_pep GSVIVT01014569001 353 37.4 56.5  
castor_bean_cds 29827.m002614 87.7 80.0 80.0 Casbene synthase, chloroplast precursor, putative
castor_bean_pep 29827.m002614 535 54.5 68.2 Casbene synthase, chloroplast precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0014741.10 length: 504 aa.
IPR001906 Terpene synthase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF01397 Terpene_synth 4.4e-55 46-210
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 2.6e-80 242-504
IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 1.1e-61 32-233
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 1.1e-93 201-504
superfamily SSF48576 Terpenoid 1.9e-98 238-504
no_ID  
Coil coil coiled-coil NA 50-71
Seg seg seg NA 39-48
55-70
252-264