Jatropha Genome Database

JcCB0013651.30 (JcS_100262.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0013651
Scaffold:
JcS_100262 JcPR04HOIK0(+) =JcCB0100471(-) =JcCB0357161(-) =JcCA0296871(-) =JcCB0152061(+) =JcCB0013651(+) =JcCB0242781(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RXE9_RICCO 597 84.1 91.6 (tr|B9RXE9) 26S protease regulatory subunit, putative OS=Ricinus communis GN=RCOM_0903260 PE=3 SV=1
Arabidopsis_pep AT4G04180.1 482 66.9 80.5 | Symbols: | AAA-type ATPase family protein | chr4:2020471-2023673 FORWARD
soybean_pep Glyma15g11870.2 209 88.4 96.4  
Medicago_pep IMGA|AC235487_4.1 140 37.2 52.5 AAA ATPase, CDC48 AC235487.1 17132-12297 H EGN_Mt090430 20090702
grape_pep GSVIVT01004817001 506 71.5 82.8  
castor_bean_cds 29842.m003529 892 86.1 86.1 26S protease regulatory subunit, putative
castor_bean_pep 29842.m003529 597 84.1 91.6 26S protease regulatory subunit, putative
JAT_13201ests gi|268518945|gb|FM887412.1|FM887412 153 100.0 100.0 FM887412 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000611, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0013651.30 length: 344 aa.
IPR003593 ATPase, AAA+ type, core
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 no description 5.3e-16 105-240
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 1.6e-35 109-237
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 210-229
no_ID  
Gene3D G3DSA:3.40.50.300 no description 4.2e-42 59-237
HMMPanther PTHR23073 26S 2.5e-56 58-282
superfamily SSF52540 P-loop 1.3e-49 56-323