Jatropha Genome Database

JcCB0013651.10 (JcS_100262.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0013651
Scaffold:
JcS_100262 JcPR04HOIK0(+) =JcCB0100471(-) =JcCB0357161(-) =JcCA0296871(-) =JcCB0152061(+) =JcCB0013651(+) =JcCB0242781(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9HZB4_POPTR 493 80.7 84.9 (tr|B9HZB4) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_568093 PE=4 SV=1
Arabidopsis_pep AT4G22150.1 401 67.0 76.8 | Symbols: PUX3 | PUX3; protein binding | chr4:11731272-11732800 REVERSE
soybean_pep Glyma15g11860.1 421 72.8 79.0  
Medicago_pep IMGA|Medtr5g093190.1 333 58.6 69.7 UBX; UBA-like; SEP chr05_pseudomolecule_IMGAG_V3 36636905-36632775 E EGN_Mt090430 20090702
grape_pep GSVIVT01004812001 435 75.0 81.2  
castor_bean_cds 29842.m003530 807 86.1 86.1 NSFL1 cofactor p47, putative
castor_bean_pep 29842.m003530 472 80.3 84.9 NSFL1 cofactor p47, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c01974 1792 99.9 99.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0013651.10 length: 303 aa.
IPR001012 UBX
method AccNumber shortName E-value location
HMMPfam PF00789 UBX 4e-14 228-302
HMMSmart SM00166 no description 0.0018 224-303
ProfileScan PS50033 UBX 17.994 225-302
IPR012989 SEP domain
HMMPfam PF08059 SEP 2.4e-27 118-192
HMMSmart SM00553 no description 1e-41 110-204
ProfileScan PS51399 SEP 33.235 113-177
superfamily SSF102848 NSFL1 2.7e-23 105-180
no_ID  
Gene3D G3DSA:3.10.20.90 no description 1.2e-36 178-303
HMMPanther PTHR23333 UBX 7.7e-118 93-303
HMMPanther PTHR23333:SF6 PHOSPHATASE-RELATED 7.7e-118 93-303
Seg seg seg NA 32-38
83-96
198-210
superfamily SSF54236 Ubiquitin-like 1.1e-19 216-302