Jatropha Genome Database

JcCB0012961.10 (JcS_100508.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0012961
Scaffold:
JcS_100508 JcCB0012961(+) =JcCA0314441(+) =JcCB0819751(-) =JcCB0464881(-) =JcCB0125571(+) =JcCA0284691(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SBT1_RICCO 204 81.6 91.2 (tr|B9SBT1) Aspartyl-tRNA synthetase, putative OS=Ricinus communis GN=RCOM_1043210 PE=3 SV=1
Arabidopsis_pep AT4G31180.2 183 72.8 86.8 | Symbols: | aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase, putative | chr4:15156696-15159362 FORWARD
soybean_pep Glyma14g11710.2 187 75.0 87.5  
Medicago_pep IMGA|Medtr1g016920.1 183 74.1 85.7 Aspartyl-tRNA synthetase bacterial/mitochondrial type; Nucleic acid-binding, OB-fold, subgroup chr01_pseudomolecule_IMGAG_V3 3443141-3437816 E EGN_Mt090430 20090702
grape_pep GSVIVT01035583001 187 73.7 88.6  
castor_bean_cds 29910.m000926 297 88.3 88.3 aspartyl-tRNA synthetase, putative
castor_bean_pep 29910.m000926 204 81.6 91.2 aspartyl-tRNA synthetase, putative
JAT_13201ests gi|268519238|gb|FM887705.1|FM887705 151 83.0 83.0 FM887705 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000955, mRNA sequence
KJC_r1 KJC_c00644 274 86.4 86.4  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0012961.10 length: 352 aa.
IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N)
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006412 translation    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPfam PF00152 tRNA-synt_2 7.4e-19 191-289
IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006412 translation    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPanther PTHR22594 ASPARTYL/LYSYL-TRNA 1.5e-48 189-304
no_ID  
Gene3D G3DSA:3.30.930.10 no description 2.9e-21 148-303
HMMPanther PTHR22594:SF6 ASPARTYL-TRNA 1.5e-48 189-304
Seg seg seg NA 97-122
321-338
superfamily SSF55681 Class 1.2e-26 148-305