Jatropha Genome Database

JcCB0011381.20 (JcS_101555.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0011381
Scaffold:
JcS_101555 JcCA0140751(-) =JcCB0011381(-) =JcCB0125761(-) =JcCD0055602(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9N5S0_POPTR 792 75.0 84.4 (tr|B9N5S0) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_785177 PE=4 SV=1
Arabidopsis_pep AT4G20860.1 577 54.9 72.0 | Symbols: | FAD-binding domain-containing protein | chr4:11172726-11174318 FORWARD
soybean_pep Glyma06g47980.1 672 62.0 77.8  
Medicago_pep IMGA|Medtr3g017140.1 675 61.7 78.8 FAD linked oxidase, N-terminal; Berberine/berberine-like chr03_pseudomolecule_IMGAG_V3 3542009-3540047 F EGN_Mt090430 20090702
grape_pep GSVIVT01021726001 541 50.6 68.8  
castor_bean_cds 30075.m001156 268 80.5 80.5 Reticuline oxidase precursor, putative
castor_bean_pep 30075.m001156 784 72.8 83.0 Reticuline oxidase precursor, putative
JAT_13201ests gi|268522567|gb|FM896552.1|FM896552 93.7 84.9 84.9 FM896552 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003789, mRNA sequence
KJC_r1 KJC_c04144 54.0 81.6 81.6  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0011381.20 length: 586 aa.
IPR006093 Oxygen oxidoreductase covalent FAD-binding site
method AccNumber shortName E-value location
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
PatternScan PS00862 OX2_COVAL_FAD NA 135-168
IPR006094 FAD linked oxidase, N-terminal
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 FAD binding    
HMMPfam PF01565 FAD_binding_4 5.7e-26 135-272
IPR012951 Berberine/berberine-like
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 FAD binding    
HMMPfam PF08031 BBE 1.6e-22 525-582
IPR016166 FAD-binding, type 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0050660 FAD binding    
ProfileScan PS51387 FAD_PCMH 17.472 131-305
superfamily SSF56176 FAD-binding 1.3e-44 82-306
no_ID  
HMMPanther PTHR11748 D-LACTATE 0.00012 133-278
Seg seg seg NA 49-59
61-74
234-245