Jatropha Genome Database

JcCB0011201.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0011201
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SPX3_RICCO 646 86.4 93.2 (tr|B9SPX3) Corticosteroid 11-beta-dehydrogenase, putative OS=Ricinus communis GN=RCOM_1102270 PE=4 SV=1
Arabidopsis_pep AT4G10020.1 535 74.2 86.9 | Symbols: AtHSD5 | AtHSD5 (hydroxysteroid dehydrogenase 5); binding / catalytic/ oxidoreductase | chr4:6268363-6270179 FORWARD
soybean_pep Glyma01g43780.1 541 74.6 86.5  
Medicago_pep IMGA|Medtr5g008900.1 533 69.6 82.7 Short-chain dehydrogenase/reductase SDR chr05_pseudomolecule_IMGAG_V3 1788703-1786525 H EGN_Mt090430 20090702
grape_pep GSVIVT01036430001 556 76.6 88.0  
castor_bean_cds 29938.m000612 831 85.7 85.7 Corticosteroid 11-beta-dehydrogenase, putative
castor_bean_pep 29938.m000612 646 86.4 93.2 Corticosteroid 11-beta-dehydrogenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0011201.10 length: 352 aa.
IPR002198 Short-chain dehydrogenase/reductase SDR
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
HMMPanther PTHR19410 SHORT-CHAIN 7.5e-114 43-284
HMMPfam PF00106 adh_short 6.3e-23 48-215
IPR002347 Glucose/ribitol dehydrogenase
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
FPrintScan PR00081 GDHRDH 2.4e-14 49-66
124-135
171-187
197-216
IPR016040 NAD(P)-binding domain
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005488 binding    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.720 no description 1.4e-47 45-315
superfamily SSF51735 NAD(P)-binding 2.9e-51 46-296
IPR020904 Short-chain dehydrogenase/reductase, conserved site
Molecular Function GO:0016491 oxidoreductase activity    
PatternScan PS00061 ADH_SHORT NA 184-212
no_ID  
HMMPanther PTHR19410:SF34 11BETA-HYDROXYSTEROID 7.5e-114 43-284