Jatropha Genome Database

JcCB0009671.10 (JcS_104724.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0009671
Scaffold:
JcS_104724 JcCB0386201(-) =JcCB0009671(-) =JcCB0418811(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S6B4_RICCO 207 89.0 97.2 (tr|B9S6B4) Ring finger protein, putative OS=Ricinus communis GN=RCOM_0534690 PE=4 SV=1
Arabidopsis_pep AT3G19910.1 182 79.8 91.3 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr3:6926497-6929324 FORWARD
soybean_pep Glyma10g43120.1 186 83.0 91.5  
Medicago_pep IMGA|Medtr1g143530.1 189 84.9 91.5 Zinc finger, RING-type chr01_pseudomolecule_IMGAG_V3 31712374-31718707 E EGN_Mt090430 20090702
grape_pep GSVIVT01026184001 197 86.8 94.3  
castor_bean_cds 29634.m002088 343 88.5 88.5 ring finger protein, putative
castor_bean_pep 29634.m002088 207 89.0 97.2 ring finger protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c06063 143 98.8 98.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0009671.10 length: 115 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 no description 4.1e-06 66-106
ProfileScan PS50089 ZF_RING_2 11.752 66-107
IPR018957 Zinc finger, C3HC4 RING-type
HMMPfam PF00097 zf-C3HC4 1.3e-08 66-106
no_ID  
Gene3D G3DSA:3.30.40.10 no description 2.4e-12 59-112
HMMPanther PTHR14155 RING 4.5e-18 23-106
HMMPanther PTHR14155:SF2 RING 4.5e-18 23-106
superfamily SSF57850 RING/U-box 4.7e-16 43-115