Jatropha Genome Database

JcCB0009541.10 (JcS_103730.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0009541
Scaffold:
JcS_103730 JcCA0088981(-) =JcCB0009541(-) =JcCA0276801(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RA22_RICCO 565 74.6 80.3 (tr|B9RA22) Caspase, putative OS=Ricinus communis GN=RCOM_1502860 PE=4 SV=1
Arabidopsis_pep AT1G02170.1 470 64.7 73.3 | Symbols: LOL3, ATMCPB1, MCP1B, AMC1, ATMC1 | AMC1 (METACASPASE 1); cysteine-type endopeptidase | chr1:411883-413426 FORWARD
soybean_pep Glyma08g45470.1 469 63.0 71.3  
Medicago_pep IMGA|Medtr2g009030.1 327 55.4 69.6 Peptidase C14, caspase catalytic subunit p20 chr02_pseudomolecule_IMGAG_V3 1892822-1890490 F EGN_Mt090430 20090702
grape_pep GSVIVT01013843001 530 69.3 77.4  
castor_bean_cds 30147.m014365 755 86.1 86.1 caspase, putative
castor_bean_pep 30147.m014365 565 74.6 80.3 caspase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0009541.10 length: 370 aa.
IPR005735 Zinc finger, LSD1-type
method AccNumber shortName E-value location
HMMPfam PF06943 zf-LSD1 3.1e-11 7-31
HMMTigr TIGR01053 LSD1: 2.7e-11 4-34
IPR011600 Peptidase C14, caspase catalytic
Molecular Function GO:0004197 cysteine-type endopeptidase activity    
Biological Process GO:0006508 proteolysis    
HMMPfam PF00656 Peptidase_C14 1.5e-63 86-363
no_ID  
Seg seg seg NA 37-51
58-85
333-349